-
景观分析工具:
arcgis
中
patch analysis
模块
关键字:景观分析
arcgis patch
analysis
地理信息系统
转自:
/s/blog_
模块下载地址:
< br>/~rrempel/patch/pa_Setup_
模块安装步骤:
1. First
uninstall any existing versions of Patch Analyst
and then run
the setup program (e.g.,
pa_Setup_).
2.
Open
ArcMap,
but
note
that
on
Windows
7
and
Vista
you
must
right
click
on
the
ArcMap
icon,
and
as
Admin
in
order
to
see
the
dlls
and
finish
the final install steps, even if you
are logged on to the computer as
Admin.
You probably also
need to be logged on as Admin on Win XP.
3. Click on
4. Click on the
5. Find
6. - Click the
- Navigate to the directory where Patch
Analyst is stored
(usually
C:Program
FilesArcGISextensionsPatchAnalyst
).
- Select
- A window will
appear showing the objects added. Click
- Repeat for
7. In the
'Commands' column (right hand side) click and drag
and drop
-
When
you move the
item to an
acceptable location
(e.g.
between Windows
and Help menu items, a
vertical bar will appear)
8.
Open
the
tutoria
data
set
map.
Under
File...Open,
navigate
to
C:Patch
AnalystSamples
and select
Patch Analyst Sample
(按:
大概
由于现在所分析的数据空间尺度过大,
导致
fragstats
运行无法分配
内存,提示
,尝试使用
arcgis
的景观分析模块,正
在探索中……)
原文地址
/~rrempel/ec
ology/papers/
什么是
ARCGIS ?
斑块分析师?
斑块分析师是
ArcGIS ?软件系统扩展模块,有利于景观
斑块的空间分析与建模
与修补程序相关的属性。
它是用来进行空
间格局分析,
常栖息地建模,
生物多样
性保护和森林管理的支持。
该方案包括能力的特点补丁模式和
分配能力补丁的
价值观基础上的补丁属性(例如立场年龄,林冠组成和冠封闭组合)的组
合。它
有两个版本,斑块和栅格斑块
;
后
者是栅格分析,而前者是用于多边形层。
Patch analyst is an extension to the
ArcGIS?software system that
facilitates
the spatial analysis of landscape patches and the
modeling
of attributes associated with
patches. It is used for spatial pattern
analysis,
often
in
support
of
habitat
modeling,
biodiversity
conservation
and
forest
management.
The
program
includes
capabilities
to
characterize
patch
pattern
and
the
ability
to
assign
patch
values
based
on
combinations
of patch
attributes (e.g. combinations of stand age,
overstory
composition and crown
closure). It is available in two versions, Patch
and Patch grid; the former is used with
polygon layers while the latter
is for
raster (grid) layers.
它如何工作的?
?一旦程序下载,
并添加到
ArcGIS
工具栏,
用户只需点击修补或修补网格显示下
拉菜单一拉。如果相关数据(例如
,栅格文件对应于
Patch Grid
)不是当前地
图的一部分,有关数据类型的属性选项将不可用,并且在菜单上显示为灰色。
Once the program is downloaded and
added to the ArcGIS toolbar the user
simply clicks on Patch or
Patch Grid to reveal a pull down menu.
If relevant data (e.g. a raster
file
for
Patch
Grid)
is
not
a
part
of
the
current
map,
options
pertaining
to that data type will be unavailable
and appear faded on the menu.
?各种可用的操作
,允许用户:按字段
dissolve
(簇)和重分类多边形或
栅格,
相交(合并)层,建立核心领域,六边形区域,添加或刷新面积和周长字段,从<
/p>
FRI
字符串字段创建变量以及对图层中的数据进行各种空间统计
参数。
A
variety
of
available
operations
allow
the
user
to:
dissolve
(clump)
and
re-class polygons or
rasters by fields, intersect (combine) layers,
create
core
areas,
make
hexagon
regions,
add
or
refresh
area
and
perimeter
fields, make
variables from FRI string fields as well as
calculate a
variety of spatial
statistics on the data in the layers.
?栅格和多边形图层的空间的的计算是不同的,因此是一个
空间
统计
的实现要
涉及
patch analyst
和
patch
grid
两个模块。
The
Spatial Analysis statistics for raster and polygon
layers are
calculated differently and
therefore there is a 'Spatial Statistics'
selection on both the Patch Analyst and
Patch Grid menus.
?某些功能有所不同,取决于是否多边形或栅
格文件。例如,
patch
模块的
Di
ssolve
功能直接使用了
ArcGIS
< br>?的
Dissolve
工具,
而
在栅格模块中是将相邻
类似像元合并在一起。。
Some
functions
differ
depending
on
whether
the
layer
is
a
polygon
or
raster
file. For example, the dissolve
function in Patch Analyst uses the
Dissolve tool in ArcGIS?, while in
Patch Grid the tool clumps adjacent
like pixels together.
两个模块中相交
Intersect
(合并
combine
)命令也以不同的方式工作。在多边
p>
形斑块分析模块进行多边形相交分析时,使用
ArcGIS ?的<
/p>
Intersect
工具,在
栅格斑块分
析模块使用另一种针对栅格图层的算法。
The
Intersect (combine) command also works differently
in Patch Analyst
and
Patch
Grid.
When
intersecting
polygons
in
Patch
Analyst,
the
ArcGIS?
Intersect
tool is
used
and Patch
Grid uses
a different method
for raster
layers.
批量及区域分析
BATCH
AND REGIONS ANALYSIS
可以自动进行批量分析或区域分析。<
/p>
批量分析将对预先选定的
shapefile
文件分
别进行单独分析。区域分析将一个大的分析图层细分成许多
< br>
区域,并分析每个
更小的分析单位。
< br>这些区域可以是行政区,
生态区或任意区域,
并可以包括
行政
区域,流域,或六边形网格叠加。斑块分析师提供了一个便于产生
< br>
六边形叠加
的工具,这些叠加可与原来的分析层相交。
Analysis can be automated
by using either batch analysis or regions
analysis. Batch analysis will run
separate analyses on pre-selected
shapefiles.
Regions
analysis
is
used
where
a
single
large
analysis
layer
is
subdivided
into
regions,
and
analysis
is
desired
on
each
of
these
maller
analysis units. Regions can be
administrative, ecological or arbitrary,
and can include such things as
administrative districts, watersheds, or
a hexagon grid overlay. Patch Analyst
provides a facility to generate a
hexagon overlay, and this overlay can
be intersected with the original
analysis layer.
对栅格数据的斑块分析
从栅格数据创建斑块主题是创建一个新图层
(主题)
,
每类像素簇被指定其面积
和周长。这是斑块分析的一个必要步骤。
Create
Patch
Theme
from
Grid
creates
a
new
layer
(theme),
where
each
clump
of like-classified pixels is assigned
its own area and perimeter. This
is a
necessary step for patch analysis.
聚集栅格(网格)
(与
shiape<
/p>
文件的
dissolve
类似)很复杂,
需要对运行过程
多加注意。
对栅格数据执行景观形状分析经常比
对
shape
文件执行该过程要快。
聚集栅格(网格)并不是必要步骤,因为这是
Fragstats
的常规任务。但是,聚
簇需要同一类型的每个斑块信息(即制作
斑块直方图)。当从
shape file
或
coverage
文件创建栅格(网格)时,将提示用户输入要素字段,并用它来创建
栅格(网格
),聚簇的方法(见下文)以及存储栅格(网格)文件的位置。其
结
果是输出了带有要素属性表的栅格(网格)数据。属性表中每种类型一行。为了<
/p>
绘制斑块直方图,
计算斑块数量,
一个类
型中的每一斑块都需要用一行进行表示
(邻接的像素簇)。解
散栅格(网格)将简化表,并对每个斑块创建行。
Clumping rasters (grids) (analogous
with dissolve for shape files) is
complex and requires that careful
attention be paid to the process.
Performing
a
landscape
pattern
analysis
on
a
raster
(grid)
file
is
often
faster than on a shape file. Clumping
rasters (grids) is not necessary
when
performing a spatial
analysis
in Patch Grid
because this
is done by
the
Fragstats
routine.
However,
clumping
is
required
when
information
for
each patch within the same class is
needed (i.e., producing patch
histograms).
When
creating
a
raster
(grid)
from
a
shape
file
or
coverage,
the user is
prompted for the feature field to use to create
the raster
(grid), the clumping method
(see below), and the location to store the
raster (grid). The result is a raster
(grid) with a table of feature
attributes. The table contains one row
for each class. To produce patch
histograms,
calculate
the
number
of
patches
etc.,
a
row
is
needed
for
each
patch
(contiguous
clump
of
pixels)
within
each
class.
Dissolving
a
raster
(grid) will simplify
the table and create a row for each patch.
注意:在解散栅格(网格)时会提示选择一种聚簇方法。
Note
: When dissolving a
raster (grid) you will be asked to select a
Clumping Method.
4N
和<
/p>
8N
之间的区别是聚簇邻接像素的邻居(
N
)数量。例如,在下面的例子中
有两个斑块
< br>A
和
B
(白色像元)。如果
p>
4N -
使用直角方法被选中,每个像素周
围搜索将包括每个像素的四边。
任何临边的具有相同值的像素被发现,
两个像素
将被聚簇在一起。
在下面的例子是使用
4N-
直角
方法产
生的两个不同的斑块
(斑
块
A
和斑块
B
)。相反,如果
8N -
使用对角线被选中的搜索将包括每个像素的
四边和
对角线上的每个像素,
或每个周围的像素,
因此八个邻居。
p>
在这个例子中,
如使用
8N -
使用对角线法定义则将只有一个包括所有白色像素的单独斑块。
The difference between 4N and 8N is
the number of neighbours (N) used
in
clumping contiguous pixels. For instance, in the
example below, two
patches are present,
A and B (white cells). If 4N - Use Orthogonals is
selected, a search around
each pixel will include
the
four sides
of each
pixel. If
a pixel with the same value is found on any of the
four sides
of pixel, the two pixels
will be clumped together. In the example below
there are two distinct patches when the
4N - Use Orthogonals method is
used
(Patch
A
and
Patch
B).
In
contrast,
if
8N
-
Use
Diagonals
is
selected
the
searches will include
the four sides
of each pixel
and the
diagonals
of
each
pixel,
or
each
surrounding
pixel,
hence
eight
neighbours.
In
the
example, only one
discrete patch would be defined using the 8N - Use
Diagonals method, and it would include
all the white pixels
解散栅格的步骤:
To
dissolve a raster (grid):
Select the desired raster (grid) to
dissolve from the ArcMap table of
contents.
1.
Choose
Create Patch Theme
from Grid
from the Patch Grid menu .
2.
Choose the
field to clump by and then click
OK
.
1.
Select the
Clumping Method (4N - Use orthogonals or 8N - Use
Diagonals) and then
click
OK
and the tool will
execute. For more
information on
Clumping Method refer to
Create Patch
Theme from
Grid
.
叠加(合并)栅格
Intersect (Combine) Grids
<
/p>
相交
(合并)
栅格允许用户对栅格图层进
行叠加,
尤其适用于叠加六边形
图层(在斑块图层被转换为栅格
格式后)。
Intersect
(Combine)
Grids
allows
users
to
intersect
raster
(grid)
layers
(themes),
and
is
especially
useful
to
intersect
the
hexagon
layer
(theme)
(once
its
been
converted
to
raster
(grid)
format)
with
a
specified patch layer (theme).
叠加(合并)栅格教程
Intersect (Combine) Grids Tutorial
1.
Intersecting grids is often the first
step for Analysis by
Regions.
To
combine
to
raster
(grid)
layers
(themes)
into
one
layer
(theme) select
Intersect (Combine)
Grids
from
the Patch Grid
Menu.
2.
Choose
the first raster (grid) from the pull down menu of
available layers (themes) and click
OK
.
3.
Choose the
second raster (grid) from the pull down menu of
remaining available layers (themes) and
click
OK
.
4.
The
user
will
then
be
prompted
for
a
name
and
location
of
the
new
layer
(theme)
that
will
be
created.
Once
that
is
done
and
the user clicks
Save
the rasters (grids)
will be combined.
将栅格剪辑为多边形主题
Clip Grids to Polygon Theme
此功能将栅格(网格)剪辑为一个多边形图层(主题)。它不同于其他
< br>arcgis
中你可以找到的类似程序,
将新栅格的大小
以剪辑的多边形图层
大小来定义。其
结果是栅格文件占用的空间被大幅度减小,尤其是是由
Fragstats
导出的栅格文件。
使用此功能可能会解决遇到
Fr
agstats
引擎
输入栅格数据文件的大小限制发生的诸如<
/p>
输出文件未找到
或其他
Fragstats
错误。
This
function
will
clip
a
raster
(grid)
to
a
polygon
layer
(theme).
It differs from
other similar procedures you might find in ArcGIS
in that the extents of the new grid is
defined by the extents of
the clip
polygon theme. This results in a considerable
reduction
in
the
size
of
the
grid,
and
especially
the
exported
grid
file
that
is used
by Fragstats. Using this function may resolve many
of of
the
encountered,
as
the
Fragstats
engine
is
limited
by
the
size
of
the
input
raster data file.
剪辑栅格为多边形教程
Clip Grids to Polygon Theme Tutorial
5.
To
clip
a
raster
(grid)
to
a
polygon
layer
(theme)
select
Clip
Grids
to
Polygon
Theme
from
the Patch
Grid
Menu.
A
dialog
box
with
a
pull-down
menu
containing
all
available
raster
(grid)
layers (themes) (i.e.
on the current map) will open.
6.
Choose
the
raster
(grid)
layer
(theme)
that
is
to
be
clipped
and click
OK
. The
next dialog box to appear will contain a
list
of
all
possible
polygon
layers
(themes)
that
can
be
used
to clip the raster
(grid). Choose one and click
OK
.
7.
The
user
will
then
be
prompted
for
a
name
and
a
location
(drive
path) for the new
layer (theme) to be saved. Once the file
name is entered and the user clicks
Save
, the tool will
execute and clip the raster (grid) to
the polygon layer
(theme)
。
空间分析(
fragstats
界面)
Spatial Statistics
(FragStats Interface)
从
patch grid
菜单选择
Spatial Statistics
(FragStats
Interface)
菜单项打开界面。
Selecting
Spatial Statistics
(FragStats Interface)
from
the Patch
Grid
menu brings
up
the
Statistics
dialog
box.
点击
Run
按钮时,
选定的
栅格将输出到系统临时目录,
于是产生一个参数
列表,
Fragstats
执行,然后生成的文件
f
rag_
,
frag_
和
frag_
。
这些临时的文本文件将被删除补丁电网
与未来的执行,
因此,如果你想保
留
原来的
Fragstats
输出,重命名文件是必要的。
When
Run
is clicked, the selected
grid is exported to the system
temporary directory, whereupon a
parameter list is generated,
Fragstats
is executed, and then the files frag_,
frag_,
and
frag_
are
generated.
These
temporary
text
files
are
removed
with
the
next
execution
of
Patch
Grid,
therefore
renaming the files
is necessary if you wish to keep the original
Fragstats output.
从这些统计数据读入
ArcGIS
中,并在用户指
定的位置(如果输出表的名
称和位置都没有指定,
分析将无法运
行)
表中。
根据被用来运行栅格
p>
(网
格)
图层的大小和计算机的速度,
p>
它可能需要几分钟时间,
用户得到一个
消息
,说输出已成功创建。输出表将无法显示,直到收到这个确认消息。
Statistics
from
these
are
read
into
ArcGIS,
and
presented
in
a
table
in the location
specified by
the
user (analysis will not run if an
output
table
name
and
location
are
not
specified).
Depending
on
the
speed of the computer being used to run
Patch Grid and the size of
the raster
(grid) layer (theme) being analyzed, it may take a
few
minutes before the user gets a
message saying that the output was
created successfully. The output table
will not be available for
viewing until
after this confirmation message is received.
以下是栅格数据空间统计的详细参数:
The
following
is
a
breakdown
of
the
Statistics
for
Grids
dialog
box, one section at a time:
图层
Layers
这个图层窗口(左上
角),
ArcMap
图层列表中的数据会显示为可选择。
图层菜单中的每一个图层都可以作为分析数据。
但每运行一次只能分析
一
个图层。选择需分析的图层。
In
the
Layers
panel
(top
left),
the
layer(s)
(theme)
selected
from
ArcMap's
table
of
contents
will
appear.
Each
layer
(theme)
that
is
present
in
the
Layers
menu
can
be
analyzed;
however,
only
one
layer
(theme) can be analyzed at a time.
Select the layer (theme) that
you wish
to analyze.
类型
Class
类型框属性从选定图层的属性表中选择。
The
Class
box
allows
selection
of
the
class
field
from
the
selected
layer's
attribute
table
to
be
analyzed.
Both
character
and
numeric
classes can be analyzed.
分析
Analyze by
该参数用于
选择在景观还是类型尺度上的统计计算。
如图层需进行景观层
面
的分析,
将对无论属于哪种类型的斑块或者单个值的数据都进行统计并
< br>生成报告。
相反,
在类型层面的分析时,
统计结果只报告景观中每种类型
的情况。
The Analyze By option allows
calculation of spatial statistics at
either
the
Landscape
or
Class
level.
If
the
layer
(theme)
is
being
analyzed
at the landscape level, all patches, regardless of
the
class they belong to, will be
analyzed and a single value will be
reported for each statistic. In
contrast, if the layer (theme) is
analyzed at the class level, the
statistics will be reported for
each
class within the landscape.
输出表格名称
Output Table Name
输出表的名称是输出表的名称
(和驱动器的路径)
,
将创建一个包含空间
统计。如果该表已经存在,附加
< br>/
覆盖选项将变为可用。默认是追加。
Output Table
Name
is the name (and
drive path)
of
the output table
that
will
be
created
containing
the
spatial
statistics.
If
the
table
already
exists,
the
Append/Overwrite
options
become
available.
The
default is Append.
综合统计
General Statistics
< br>栅格板块分析提供了
6
大类统计项:
There
are
six
categories
of
statistics
available
in
the
Patch
Grid
Analyst:
8.
Area
面积
9.
Patch Density
and Size Metrics
斑块密度和大小
Metrics
边缘
Metrics
形状
ity Metrics
多样性
Area Metrics
核心区
只需选择要计算的,并在空间统计输出表中报告的统计数据。选择
选择
所有
选
择所有的统计信息,
或选择
选择
无
,
以明确的选择。
某些统计
数字只适用于在景观水平。<
/p>
同样,
某些统计数字只适用多边形层
(主
题)
。
对于统计的适用性(多边形或栅格)和缩写可参见统计摘
要(附注
1
)。
Simply
select
the
statistics
to
be
calculated
and
reported
in
the
spatial
statistics
output
table.
Choose
All
to
select
all
the
statistics or choose
Certain statistics
are only applicable at the landscape level.
Similarly,
certain
statistics
are
only
applicable
on
polygon
layers
(themes). For a listing of statistic
applicability (polygon or
raster) and
abbreviations refer to
Statistic
Summary
.
Core Area
核心区
只适用于栅格数据的空间统计对话框中的核心区度量。
当要求对矢量图层
进行核心区分析时,用户必须首先从
patch
菜单建立核心区(创建一个
核心区图层)
,
然后把它当作一个正常的斑块图层的进行分析。
从空间统
计的对话中选择所需的统计项(即,平均斑块大小,等等),结
p>
果将是
核心区的统计数据。
在创建核心区层
(主题)
时会有两个字段添加到图层
的属性表:
I
)的核心区面积
和
II
)斑块面积。
然后可以确定选择适当
的位置来对核心区图层进行统计分析。
Core Area Metrics from
the spatial statistics dialog are only
available for raster (grid) layers
(themes). When core area
statistics are
required for vector layers (themes), the user must
first
Create Core
Areas
(create a core area layer
(theme)) from
the Patch menu and then
treat the core area layer (theme) as a
normal patch layer (theme). Choose the
desired statistics (i.e.,
Mean
Patch
size,
etc.)
from
the
spatial
statistics
dialogue
and
the
result
will
be
core
area
statistics.
When
creating
core
area
layers
(themes) two fields are added to the
layer's attribute table:
i) Core Area
and ii) Patch Area. Therefore be sure to choose
the
proper field to calculate
statistics when analyzing core area
layers (themes).
设置分析界限参数
Set
Analysis Parameters
Fragstats
还允许用户改变一些其他的分析参数,包括
MPI
的阈值,缓冲
距离,文件名
CWED
,和边界的影响。这些参数的当前设置可以看出,在
分析参数
,
栅格数据空间统计
对话框的底
部面板。要更改其中的任何
设置,点击
设置分析参数
按钮。
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